Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
THBS4P35443 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS4P35443 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.32■□□□□ 0.04
THBS4P35443 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS4P35443 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
THBS4P35443 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.32■□□□□ 0.04
THBS4P35443 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.32■□□□□ 0.04
THBS4P35443 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS4P35443 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS4P35443 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.32■□□□□ 0.04
THBS4P35443 FAAHP1-202ENST00000446499 1238 ntBASIC15.32■□□□□ 0.04
THBS4P35443 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
THBS4P35443 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS4P35443 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS4P35443 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 AC011467.2-201ENST00000598425 242 ntBASIC15.32■□□□□ 0.04
THBS4P35443 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.32■□□□□ 0.04
THBS4P35443 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS4P35443 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS4P35443 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS4P35443 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS4P35443 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
THBS4P35443 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS4P35443 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS4P35443 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
THBS4P35443 AC132008.2-207ENST00000454517 770 ntBASIC15.31■□□□□ 0.04
THBS4P35443 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.31■□□□□ 0.04
THBS4P35443 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS4P35443 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS4P35443 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.31■□□□□ 0.04
THBS4P35443 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.31■□□□□ 0.04
THBS4P35443 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
THBS4P35443 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS4P35443 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.31■□□□□ 0.04
THBS4P35443 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.31■□□□□ 0.04
THBS4P35443 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
THBS4P35443 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
THBS4P35443 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS4P35443 AP001094.4-201ENST00000579008 2176 ntBASIC15.31■□□□□ 0.04
THBS4P35443 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS4P35443 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS4P35443 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
THBS4P35443 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.3■□□□□ 0.04
THBS4P35443 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS4P35443 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS4P35443 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS4P35443 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
THBS4P35443 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS4P35443 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS4P35443 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.3■□□□□ 0.04
THBS4P35443 AKR1C7P-201ENST00000305623 895 ntBASIC15.3■□□□□ 0.04
THBS4P35443 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
THBS4P35443 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THBS4P35443 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.3■□□□□ 0.04
THBS4P35443 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS4P35443 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THBS4P35443 AC026396.1-201ENST00000419388 421 ntBASIC15.3■□□□□ 0.04
THBS4P35443 AC007967.3-201ENST00000434308 558 ntBASIC15.3■□□□□ 0.04
THBS4P35443 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.3■□□□□ 0.04
THBS4P35443 INTS4P1-201ENST00000438455 1935 ntBASIC15.3■□□□□ 0.04
THBS4P35443 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THBS4P35443 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.3■□□□□ 0.04
THBS4P35443 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms