Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC1P35251 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
RFC1P35251 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
RFC1P35251 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 POM121L3P-201ENST00000419331 1163 ntBASIC18.34■□□□□ 0.53
RFC1P35251 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.34■□□□□ 0.53
RFC1P35251 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.34■□□□□ 0.53
RFC1P35251 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.34■□□□□ 0.53
RFC1P35251 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.34■□□□□ 0.53
RFC1P35251 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.34■□□□□ 0.53
RFC1P35251 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC1P35251 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RFC1P35251 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.34■□□□□ 0.53
RFC1P35251 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC1P35251 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.33■□□□□ 0.53
RFC1P35251 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.33■□□□□ 0.53
RFC1P35251 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC1P35251 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.33■□□□□ 0.53
RFC1P35251 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.33■□□□□ 0.53
RFC1P35251 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RFC1P35251 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RFC1P35251 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.33■□□□□ 0.53
RFC1P35251 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC1P35251 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RFC1P35251 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RFC1P35251 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.33■□□□□ 0.53
RFC1P35251 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC1P35251 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC1P35251 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.33■□□□□ 0.52
RFC1P35251 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFC1P35251 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RFC1P35251 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RFC1P35251 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.33■□□□□ 0.52
RFC1P35251 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RFC1P35251 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.33■□□□□ 0.52
RFC1P35251 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.33■□□□□ 0.52
RFC1P35251 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.33■□□□□ 0.52
RFC1P35251 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC1P35251 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RFC1P35251 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC1P35251 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RFC1P35251 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFC1P35251 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RFC1P35251 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC1P35251 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC1P35251 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RFC1P35251 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RFC1P35251 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RFC1P35251 AC046185.3-201ENST00000623228 1824 ntBASIC18.33■□□□□ 0.52
RFC1P35251 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RFC1P35251 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RFC1P35251 AC116353.5-201ENST00000638148 1699 ntBASIC18.32■□□□□ 0.52
RFC1P35251 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.32■□□□□ 0.52
RFC1P35251 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.32■□□□□ 0.52
RFC1P35251 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.32■□□□□ 0.52
RFC1P35251 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.32■□□□□ 0.52
RFC1P35251 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.32■□□□□ 0.52
RFC1P35251 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.32■□□□□ 0.52
RFC1P35251 MIR5100-201ENST00000579544 119 ntBASIC18.32■□□□□ 0.52
RFC1P35251 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
RFC1P35251 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RFC1P35251 AC020916.1-201ENST00000587762 1774 ntBASIC18.32■□□□□ 0.52
RFC1P35251 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RFC1P35251 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.31■□□□□ 0.52
RFC1P35251 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms