Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCKBRP32239 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCKBRP32239 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CCKBRP32239 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.7■□□□□ 0.26
CCKBRP32239 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCKBRP32239 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCKBRP32239 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCKBRP32239 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCKBRP32239 KRT18P28-201ENST00000453838 1332 ntBASIC16.7■□□□□ 0.26
CCKBRP32239 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCKBRP32239 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.69■□□□□ 0.26
CCKBRP32239 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CCKBRP32239 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.69■□□□□ 0.26
CCKBRP32239 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.69■□□□□ 0.26
CCKBRP32239 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.69■□□□□ 0.26
CCKBRP32239 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.69■□□□□ 0.26
CCKBRP32239 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCKBRP32239 MYCLP1-201ENST00000372451 1075 ntBASIC16.69■□□□□ 0.26
CCKBRP32239 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCKBRP32239 HTR5BP-201ENST00000430851 1154 ntBASIC16.69■□□□□ 0.26
CCKBRP32239 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.69■□□□□ 0.26
CCKBRP32239 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.69■□□□□ 0.26
CCKBRP32239 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.69■□□□□ 0.26
CCKBRP32239 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.69■□□□□ 0.26
CCKBRP32239 AL353135.1-201ENST00000606729 504 ntBASIC16.69■□□□□ 0.26
CCKBRP32239 AL513190.1-201ENST00000621254 727 ntBASIC16.69■□□□□ 0.26
CCKBRP32239 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCKBRP32239 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.69■□□□□ 0.26
CCKBRP32239 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.69■□□□□ 0.26
CCKBRP32239 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCKBRP32239 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.69■□□□□ 0.26
CCKBRP32239 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CCKBRP32239 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCKBRP32239 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCKBRP32239 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.69■□□□□ 0.26
CCKBRP32239 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.68■□□□□ 0.26
CCKBRP32239 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.68■□□□□ 0.26
CCKBRP32239 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCKBRP32239 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CCKBRP32239 IGLL3P-201ENST00000412472 434 ntBASIC16.68■□□□□ 0.26
CCKBRP32239 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.68■□□□□ 0.26
CCKBRP32239 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.68■□□□□ 0.26
CCKBRP32239 AC096734.2-201ENST00000562054 433 ntBASIC16.68■□□□□ 0.26
CCKBRP32239 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
CCKBRP32239 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.68■□□□□ 0.26
CCKBRP32239 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CCKBRP32239 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCKBRP32239 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
CCKBRP32239 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCKBRP32239 AC097637.2-201ENST00000624096 1997 ntBASIC16.68■□□□□ 0.26
CCKBRP32239 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.67■□□□□ 0.26
CCKBRP32239 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.67■□□□□ 0.26
CCKBRP32239 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.67■□□□□ 0.26
CCKBRP32239 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.67■□□□□ 0.26
CCKBRP32239 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.67■□□□□ 0.26
CCKBRP32239 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.67■□□□□ 0.26
CCKBRP32239 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCKBRP32239 ELL2P1-201ENST00000413990 1906 ntBASIC16.67■□□□□ 0.26
CCKBRP32239 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 PTCHD3P3-201ENST00000403073 906 ntBASIC16.67■□□□□ 0.26
CCKBRP32239 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.67■□□□□ 0.26
CCKBRP32239 METTL21AP1-201ENST00000438852 635 ntBASIC16.67■□□□□ 0.26
CCKBRP32239 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.67■□□□□ 0.26
CCKBRP32239 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCKBRP32239 PDPK2P-202ENST00000562415 1191 ntBASIC16.67■□□□□ 0.26
CCKBRP32239 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCKBRP32239 AC009949.1-201ENST00000623048 1830 ntBASIC16.67■□□□□ 0.26
CCKBRP32239 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.67■□□□□ 0.26
CCKBRP32239 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CCKBRP32239 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCKBRP32239 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCKBRP32239 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms