Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.98□□□□□ -0.01
CD40P25942 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.98□□□□□ -0.01
CD40P25942 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CD40P25942 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 AC007967.2-201ENST00000432613 625 ntBASIC14.98□□□□□ -0.01
CD40P25942 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
CD40P25942 RNA5SP416-201ENST00000516838 111 ntBASIC14.98□□□□□ -0.01
CD40P25942 IGHV3-65-201ENST00000523210 341 ntBASIC14.98□□□□□ -0.01
CD40P25942 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.98□□□□□ -0.01
CD40P25942 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.98□□□□□ -0.01
CD40P25942 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.98□□□□□ -0.01
CD40P25942 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.98□□□□□ -0.01
CD40P25942 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CD40P25942 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CD40P25942 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.98□□□□□ -0.01
CD40P25942 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CD40P25942 AL355312.1-201ENST00000407115 2176 ntBASIC14.98□□□□□ -0.01
CD40P25942 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.98□□□□□ -0.01
CD40P25942 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.98□□□□□ -0.01
CD40P25942 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 OR6D1P-202ENST00000641007 5290 ntBASIC14.98□□□□□ -0.01
CD40P25942 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CD40P25942 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD40P25942 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.98□□□□□ -0.01
CD40P25942 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.97□□□□□ -0.01
CD40P25942 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40P25942 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.97□□□□□ -0.01
CD40P25942 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40P25942 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40P25942 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.97□□□□□ -0.01
CD40P25942 AP002414.1-201ENST00000391405 1147 ntBASIC14.97□□□□□ -0.01
CD40P25942 PTCHD3P3-201ENST00000403073 906 ntBASIC14.97□□□□□ -0.01
CD40P25942 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 AC108073.2-201ENST00000464002 357 ntBASIC14.97□□□□□ -0.01
CD40P25942 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40P25942 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.97□□□□□ -0.01
CD40P25942 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.97□□□□□ -0.01
CD40P25942 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CD40P25942 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.97□□□□□ -0.01
CD40P25942 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.97□□□□□ -0.01
CD40P25942 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40P25942 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CD40P25942 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CD40P25942 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CD40P25942 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CD40P25942 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40P25942 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD40P25942 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.97□□□□□ -0.01
CD40P25942 AC133963.1-201ENST00000504166 1679 ntBASIC14.97□□□□□ -0.01
CD40P25942 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.97□□□□□ -0.01
CD40P25942 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD40P25942 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD40P25942 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD40P25942 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD40P25942 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD40P25942 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.96□□□□□ -0.01
CD40P25942 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD40P25942 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD40P25942 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
CD40P25942 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.96□□□□□ -0.01
CD40P25942 NOC2LP1-202ENST00000452600 2235 ntBASIC14.96□□□□□ -0.01
CD40P25942 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD40P25942 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD40P25942 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD40P25942 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms