Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.92■□□□□ 0.94
LMNB1P20700 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.92■□□□□ 0.94
LMNB1P20700 ALG1L8P-201ENST00000533887 760 ntBASIC20.92■□□□□ 0.94
LMNB1P20700 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.92■□□□□ 0.94
LMNB1P20700 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LMNB1P20700 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LMNB1P20700 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMNB1P20700 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LMNB1P20700 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMNB1P20700 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LMNB1P20700 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
LMNB1P20700 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LMNB1P20700 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LMNB1P20700 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.92■□□□□ 0.94
LMNB1P20700 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LMNB1P20700 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMNB1P20700 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LMNB1P20700 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LMNB1P20700 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LMNB1P20700 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LMNB1P20700 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMNB1P20700 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMNB1P20700 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.91■□□□□ 0.94
LMNB1P20700 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LMNB1P20700 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.91■□□□□ 0.94
LMNB1P20700 AC107918.2-201ENST00000530817 355 ntBASIC20.91■□□□□ 0.94
LMNB1P20700 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.91■□□□□ 0.94
LMNB1P20700 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.91■□□□□ 0.94
LMNB1P20700 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LMNB1P20700 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.91■□□□□ 0.94
LMNB1P20700 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.91■□□□□ 0.94
LMNB1P20700 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LMNB1P20700 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.9■□□□□ 0.94
LMNB1P20700 TNXA-203ENST00000507684 2038 ntBASIC20.9■□□□□ 0.94
LMNB1P20700 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LMNB1P20700 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.9■□□□□ 0.94
LMNB1P20700 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNB1P20700 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LMNB1P20700 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNB1P20700 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNB1P20700 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNB1P20700 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNB1P20700 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.9■□□□□ 0.94
LMNB1P20700 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.9■□□□□ 0.94
LMNB1P20700 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LMNB1P20700 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LMNB1P20700 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.9■□□□□ 0.94
LMNB1P20700 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.9■□□□□ 0.94
LMNB1P20700 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.9■□□□□ 0.94
LMNB1P20700 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.9■□□□□ 0.94
LMNB1P20700 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.9■□□□□ 0.94
LMNB1P20700 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNB1P20700 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.9■□□□□ 0.94
LMNB1P20700 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.9■□□□□ 0.94
LMNB1P20700 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.9■□□□□ 0.94
LMNB1P20700 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.9■□□□□ 0.94
LMNB1P20700 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LMNB1P20700 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNB1P20700 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.9■□□□□ 0.94
LMNB1P20700 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.9■□□□□ 0.94
LMNB1P20700 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LMNB1P20700 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.9■□□□□ 0.94
LMNB1P20700 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
LMNB1P20700 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LMNB1P20700 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.89■□□□□ 0.94
LMNB1P20700 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LMNB1P20700 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
LMNB1P20700 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
LMNB1P20700 AC100757.3-201ENST00000622361 1406 ntBASIC20.89■□□□□ 0.94
LMNB1P20700 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
LMNB1P20700 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.89■□□□□ 0.94
LMNB1P20700 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNB1P20700 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNB1P20700 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.89■□□□□ 0.93
LMNB1P20700 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LMNB1P20700 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.89■□□□□ 0.93
LMNB1P20700 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.89■□□□□ 0.93
LMNB1P20700 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.89■□□□□ 0.93
LMNB1P20700 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
LMNB1P20700 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LMNB1P20700 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNB1P20700 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LMNB1P20700 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.89■□□□□ 0.93
LMNB1P20700 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNB1P20700 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.89■□□□□ 0.93
LMNB1P20700 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LMNB1P20700 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMNB1P20700 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMNB1P20700 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMNB1P20700 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LMNB1P20700 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMNB1P20700 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.88■□□□□ 0.93
LMNB1P20700 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.88■□□□□ 0.93
LMNB1P20700 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LMNB1P20700 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LMNB1P20700 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMNB1P20700 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.88■□□□□ 0.93
LMNB1P20700 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.88■□□□□ 0.93
LMNB1P20700 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LMNB1P20700 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms