Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 INGX-202ENST00000489074 768 ntBASIC30.05■■■□□ 2.4
TOP2AP11388 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC30.05■■■□□ 2.4
TOP2AP11388 PUDP-206ENST00000540122 825 ntTSL 2 BASIC30.05■■■□□ 2.4
TOP2AP11388 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC30.05■■■□□ 2.4
TOP2AP11388 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
TOP2AP11388 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
TOP2AP11388 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TOP2AP11388 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC30.04■■■□□ 2.4
TOP2AP11388 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC30.04■■■□□ 2.4
TOP2AP11388 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
TOP2AP11388 EGFEM1P-202ENST00000431685 1563 ntBASIC30.04■■■□□ 2.4
TOP2AP11388 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC30.04■■■□□ 2.4
TOP2AP11388 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TOP2AP11388 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC30.04■■■□□ 2.4
TOP2AP11388 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TOP2AP11388 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
TOP2AP11388 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
TOP2AP11388 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
TOP2AP11388 CRB3P1-201ENST00000449338 276 ntBASIC30.04■■■□□ 2.4
TOP2AP11388 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
TOP2AP11388 AC008267.7-201ENST00000624570 1194 ntBASIC30.04■■■□□ 2.4
TOP2AP11388 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC30.04■■■□□ 2.4
TOP2AP11388 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
TOP2AP11388 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC30.04■■■□□ 2.4
TOP2AP11388 UXT-AS1-201ENST00000590504 1525 ntBASIC30.04■■■□□ 2.4
TOP2AP11388 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC30.04■■■□□ 2.4
TOP2AP11388 AC098818.2-201ENST00000564925 2320 ntBASIC30.04■■■□□ 2.4
TOP2AP11388 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC30.04■■■□□ 2.4
TOP2AP11388 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
TOP2AP11388 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TOP2AP11388 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC30.03■■■□□ 2.4
TOP2AP11388 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
TOP2AP11388 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TOP2AP11388 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC30.03■■■□□ 2.4
TOP2AP11388 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC30.03■■■□□ 2.4
TOP2AP11388 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TOP2AP11388 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC30.03■■■□□ 2.4
TOP2AP11388 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC30.03■■■□□ 2.4
TOP2AP11388 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TOP2AP11388 AC005034.1-201ENST00000426657 489 ntBASIC30.02■■■□□ 2.4
TOP2AP11388 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC30.02■■■□□ 2.4
TOP2AP11388 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TOP2AP11388 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TOP2AP11388 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
TOP2AP11388 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC30.02■■■□□ 2.4
TOP2AP11388 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
TOP2AP11388 AC142381.1-201ENST00000426099 345 ntBASIC30.01■■■□□ 2.4
TOP2AP11388 AC004890.2-204ENST00000481968 304 ntBASIC30.01■■■□□ 2.4
TOP2AP11388 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
TOP2AP11388 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC30.01■■■□□ 2.4
TOP2AP11388 AC016027.1-202ENST00000607927 1699 ntBASIC30.01■■■□□ 2.4
TOP2AP11388 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC30.01■■■□□ 2.39
TOP2AP11388 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TOP2AP11388 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC30.01■■■□□ 2.39
TOP2AP11388 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
TOP2AP11388 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC30.01■■■□□ 2.39
TOP2AP11388 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC30.01■■■□□ 2.39
TOP2AP11388 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC30.01■■■□□ 2.39
TOP2AP11388 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC30.01■■■□□ 2.39
TOP2AP11388 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC30.01■■■□□ 2.39
TOP2AP11388 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
TOP2AP11388 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
TOP2AP11388 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC30.01■■■□□ 2.39
TOP2AP11388 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC30.01■■■□□ 2.39
TOP2AP11388 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.39
TOP2AP11388 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC30.01■■■□□ 2.39
TOP2AP11388 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC30.01■■■□□ 2.39
TOP2AP11388 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC30■■■□□ 2.39
TOP2AP11388 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC30■■■□□ 2.39
TOP2AP11388 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TOP2AP11388 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
TOP2AP11388 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TOP2AP11388 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC30■■■□□ 2.39
TOP2AP11388 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TOP2AP11388 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
TOP2AP11388 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC30■■■□□ 2.39
TOP2AP11388 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC30■■■□□ 2.39
TOP2AP11388 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
TOP2AP11388 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
TOP2AP11388 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC30■■■□□ 2.39
TOP2AP11388 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC30■■■□□ 2.39
TOP2AP11388 TSSK5P-201ENST00000423978 907 ntBASIC30■■■□□ 2.39
TOP2AP11388 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC30■■■□□ 2.39
TOP2AP11388 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC30■■■□□ 2.39
TOP2AP11388 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC30■■■□□ 2.39
TOP2AP11388 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
TOP2AP11388 LINC02560-201ENST00000596379 459 ntBASIC30■■■□□ 2.39
TOP2AP11388 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC30■■■□□ 2.39
TOP2AP11388 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
TOP2AP11388 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
TOP2AP11388 LINC00895-201ENST00000629028 1637 ntBASIC29.99■■■□□ 2.39
TOP2AP11388 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC29.99■■■□□ 2.39
TOP2AP11388 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
TOP2AP11388 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
TOP2AP11388 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
TOP2AP11388 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC29.99■■■□□ 2.39
TOP2AP11388 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
TOP2AP11388 AC009113.1-201ENST00000570267 2443 ntBASIC29.98■■■□□ 2.39
TOP2AP11388 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
TOP2AP11388 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms