Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TOP1P11387 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.43■□□□□ 0.86
TOP1P11387 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.43■□□□□ 0.86
TOP1P11387 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.43■□□□□ 0.86
TOP1P11387 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.43■□□□□ 0.86
TOP1P11387 AL589182.2-201ENST00000619332 1049 ntBASIC20.43■□□□□ 0.86
TOP1P11387 AC116407.3-201ENST00000623905 1129 ntBASIC20.43■□□□□ 0.86
TOP1P11387 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.43■□□□□ 0.86
TOP1P11387 IL9RP2-201ENST00000423948 1312 ntBASIC20.43■□□□□ 0.86
TOP1P11387 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.43■□□□□ 0.86
TOP1P11387 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.43■□□□□ 0.86
TOP1P11387 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TOP1P11387 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.43■□□□□ 0.86
TOP1P11387 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TOP1P11387 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TOP1P11387 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TOP1P11387 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.42■□□□□ 0.86
TOP1P11387 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TOP1P11387 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.42■□□□□ 0.86
TOP1P11387 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.42■□□□□ 0.86
TOP1P11387 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TOP1P11387 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.42■□□□□ 0.86
TOP1P11387 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.42■□□□□ 0.86
TOP1P11387 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
TOP1P11387 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 AC120114.3-201ENST00000611923 658 ntBASIC20.42■□□□□ 0.86
TOP1P11387 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TOP1P11387 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TOP1P11387 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TOP1P11387 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.42■□□□□ 0.86
TOP1P11387 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.42■□□□□ 0.86
TOP1P11387 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.42■□□□□ 0.86
TOP1P11387 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TOP1P11387 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.41■□□□□ 0.86
TOP1P11387 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TOP1P11387 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 AL022342.1-201ENST00000400363 863 ntBASIC20.41■□□□□ 0.86
TOP1P11387 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 AP000347.1-202ENST00000435868 847 ntBASIC20.41■□□□□ 0.86
TOP1P11387 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.41■□□□□ 0.86
TOP1P11387 AC105339.3-201ENST00000560043 636 ntBASIC20.41■□□□□ 0.86
TOP1P11387 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.41■□□□□ 0.86
TOP1P11387 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.41■□□□□ 0.86
TOP1P11387 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.41■□□□□ 0.86
TOP1P11387 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
TOP1P11387 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.41■□□□□ 0.86
TOP1P11387 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.41■□□□□ 0.86
TOP1P11387 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.41■□□□□ 0.86
TOP1P11387 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TOP1P11387 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.41■□□□□ 0.86
TOP1P11387 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
TOP1P11387 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.4■□□□□ 0.86
TOP1P11387 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
TOP1P11387 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms