Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
UBCP0CG48 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.29■□□□□ 0.04
UBCP0CG48 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
UBCP0CG48 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.29■□□□□ 0.04
UBCP0CG48 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.29■□□□□ 0.04
UBCP0CG48 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.29■□□□□ 0.04
UBCP0CG48 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
UBCP0CG48 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
UBCP0CG48 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
UBCP0CG48 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
UBCP0CG48 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.28■□□□□ 0.04
UBCP0CG48 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
UBCP0CG48 AC097374.2-201ENST00000618617 1306 ntBASIC15.28■□□□□ 0.04
UBCP0CG48 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
UBCP0CG48 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.28■□□□□ 0.04
UBCP0CG48 AC092597.1-201ENST00000487352 616 ntBASIC15.28■□□□□ 0.04
UBCP0CG48 AC093827.2-201ENST00000512654 315 ntBASIC15.28■□□□□ 0.04
UBCP0CG48 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.28■□□□□ 0.04
UBCP0CG48 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.28■□□□□ 0.04
UBCP0CG48 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.28■□□□□ 0.04
UBCP0CG48 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.28■□□□□ 0.04
UBCP0CG48 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.28■□□□□ 0.04
UBCP0CG48 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBCP0CG48 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.27■□□□□ 0.04
UBCP0CG48 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
UBCP0CG48 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UBCP0CG48 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
UBCP0CG48 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
UBCP0CG48 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
UBCP0CG48 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.27■□□□□ 0.04
UBCP0CG48 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.27■□□□□ 0.04
UBCP0CG48 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
UBCP0CG48 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.27■□□□□ 0.04
UBCP0CG48 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 AL137013.1-201ENST00000432946 1228 ntBASIC15.27■□□□□ 0.04
UBCP0CG48 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.27■□□□□ 0.04
UBCP0CG48 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 HOMER2P1-201ENST00000455653 964 ntBASIC15.27■□□□□ 0.04
UBCP0CG48 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.27■□□□□ 0.04
UBCP0CG48 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.27■□□□□ 0.04
UBCP0CG48 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.27■□□□□ 0.04
UBCP0CG48 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.27■□□□□ 0.04
UBCP0CG48 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.27■□□□□ 0.04
UBCP0CG48 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.27■□□□□ 0.04
UBCP0CG48 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.27■□□□□ 0.04
UBCP0CG48 AC139887.4-201ENST00000607877 719 ntBASIC15.27■□□□□ 0.04
UBCP0CG48 AC005363.2-201ENST00000618631 242 ntBASIC15.27■□□□□ 0.04
UBCP0CG48 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBCP0CG48 AC060834.1-201ENST00000443027 2032 ntBASIC15.27■□□□□ 0.03
UBCP0CG48 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
UBCP0CG48 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBCP0CG48 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.27■□□□□ 0.03
UBCP0CG48 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBCP0CG48 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.27■□□□□ 0.03
UBCP0CG48 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
UBCP0CG48 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.26■□□□□ 0.03
UBCP0CG48 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.26■□□□□ 0.03
UBCP0CG48 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
UBCP0CG48 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.26■□□□□ 0.03
UBCP0CG48 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
UBCP0CG48 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBCP0CG48 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
UBCP0CG48 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.26■□□□□ 0.03
UBCP0CG48 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBCP0CG48 COX5BP2-201ENST00000392354 334 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms