Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.02■□□□□ 0.48
CD48P09326 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.02■□□□□ 0.48
CD48P09326 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CD48P09326 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.02■□□□□ 0.48
CD48P09326 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.02■□□□□ 0.48
CD48P09326 AC138894.3-201ENST00000603787 634 ntBASIC18.02■□□□□ 0.48
CD48P09326 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CD48P09326 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.02■□□□□ 0.47
CD48P09326 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD48P09326 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD48P09326 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD48P09326 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.02■□□□□ 0.47
CD48P09326 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD48P09326 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD48P09326 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CD48P09326 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD48P09326 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.01■□□□□ 0.47
CD48P09326 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD48P09326 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD48P09326 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CD48P09326 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.01■□□□□ 0.47
CD48P09326 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CD48P09326 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CD48P09326 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
CD48P09326 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD48P09326 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD48P09326 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.01■□□□□ 0.47
CD48P09326 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD48P09326 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD48P09326 KLF4P1-201ENST00000412782 1185 ntBASIC18.01■□□□□ 0.47
CD48P09326 POM121L3P-201ENST00000419331 1163 ntBASIC18.01■□□□□ 0.47
CD48P09326 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CD48P09326 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CD48P09326 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.01■□□□□ 0.47
CD48P09326 MIR5100-201ENST00000579544 119 ntBASIC18.01■□□□□ 0.47
CD48P09326 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD48P09326 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.01■□□□□ 0.47
CD48P09326 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD48P09326 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.01■□□□□ 0.47
CD48P09326 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD48P09326 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.01■□□□□ 0.47
CD48P09326 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CD48P09326 AC106886.4-201ENST00000623557 2502 ntBASIC18.01■□□□□ 0.47
CD48P09326 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CD48P09326 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD48P09326 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CD48P09326 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18■□□□□ 0.47
CD48P09326 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18■□□□□ 0.47
CD48P09326 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18■□□□□ 0.47
CD48P09326 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
CD48P09326 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CD48P09326 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 AC003669.1-201ENST00000334569 611 ntBASIC18■□□□□ 0.47
CD48P09326 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18■□□□□ 0.47
CD48P09326 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18■□□□□ 0.47
CD48P09326 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18■□□□□ 0.47
CD48P09326 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18■□□□□ 0.47
CD48P09326 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18■□□□□ 0.47
CD48P09326 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18■□□□□ 0.47
CD48P09326 AP000867.4-201ENST00000641616 219 ntBASIC18■□□□□ 0.47
CD48P09326 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18■□□□□ 0.47
CD48P09326 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18■□□□□ 0.47
CD48P09326 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
CD48P09326 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18■□□□□ 0.47
CD48P09326 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18■□□□□ 0.47
CD48P09326 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD48P09326 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
CD48P09326 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CD48P09326 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.99■□□□□ 0.47
CD48P09326 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CD48P09326 AL121761.2-201ENST00000598007 1648 ntBASIC17.99■□□□□ 0.47
CD48P09326 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CD48P09326 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
CD48P09326 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.99■□□□□ 0.47
CD48P09326 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD48P09326 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms