Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RETP07949 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RETP07949 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RETP07949 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RETP07949 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.52■□□□□ 0.4
RETP07949 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.52■□□□□ 0.4
RETP07949 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.52■□□□□ 0.4
RETP07949 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.52■□□□□ 0.4
RETP07949 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.52■□□□□ 0.4
RETP07949 AC004790.2-201ENST00000623588 572 ntBASIC17.52■□□□□ 0.4
RETP07949 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
RETP07949 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RETP07949 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RETP07949 AC093677.2-201ENST00000600169 1863 ntBASIC17.52■□□□□ 0.39
RETP07949 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RETP07949 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RETP07949 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RETP07949 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.52■□□□□ 0.39
RETP07949 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RETP07949 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
RETP07949 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 AC063926.2-201ENST00000623766 1308 ntBASIC17.51■□□□□ 0.39
RETP07949 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
RETP07949 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.51■□□□□ 0.39
RETP07949 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.51■□□□□ 0.39
RETP07949 FAM58CP-201ENST00000435741 640 ntBASIC17.51■□□□□ 0.39
RETP07949 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RETP07949 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.51■□□□□ 0.39
RETP07949 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 RPS15P9-201ENST00000494093 319 ntBASIC17.51■□□□□ 0.39
RETP07949 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.51■□□□□ 0.39
RETP07949 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.51■□□□□ 0.39
RETP07949 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.51■□□□□ 0.39
RETP07949 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RETP07949 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.51■□□□□ 0.39
RETP07949 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.51■□□□□ 0.39
RETP07949 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RETP07949 AC004877.2-201ENST00000623941 599 ntBASIC17.51■□□□□ 0.39
RETP07949 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RETP07949 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RETP07949 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.51■□□□□ 0.39
RETP07949 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RETP07949 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.51■□□□□ 0.39
RETP07949 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RETP07949 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RETP07949 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.5■□□□□ 0.39
RETP07949 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.5■□□□□ 0.39
RETP07949 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.5■□□□□ 0.39
RETP07949 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
RETP07949 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RETP07949 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RETP07949 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RETP07949 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RETP07949 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RETP07949 AC005034.1-201ENST00000426657 489 ntBASIC17.5■□□□□ 0.39
RETP07949 HLA-J-202ENST00000469281 1241 ntBASIC17.5■□□□□ 0.39
RETP07949 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.5■□□□□ 0.39
RETP07949 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.5■□□□□ 0.39
RETP07949 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.5■□□□□ 0.39
RETP07949 AC096734.2-201ENST00000562054 433 ntBASIC17.5■□□□□ 0.39
RETP07949 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.5■□□□□ 0.39
RETP07949 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
RETP07949 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.5■□□□□ 0.39
RETP07949 AC010654.1-201ENST00000615722 808 ntBASIC17.5■□□□□ 0.39
RETP07949 AL513210.1-201ENST00000629608 234 ntBASIC17.5■□□□□ 0.39
RETP07949 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RETP07949 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RETP07949 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.5■□□□□ 0.39
RETP07949 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.5■□□□□ 0.39
RETP07949 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RETP07949 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RETP07949 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RETP07949 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.5■□□□□ 0.39
RETP07949 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RETP07949 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RETP07949 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RETP07949 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RETP07949 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
RETP07949 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 BCAR1-209ENST00000546196 1340 ntBASIC17.49■□□□□ 0.39
RETP07949 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 AC138028.4-201ENST00000564984 1845 ntBASIC17.49■□□□□ 0.39
RETP07949 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms