Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CAPNS1P04632 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPNS1P04632 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPNS1P04632 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.31■□□□□ 0.36
CAPNS1P04632 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.31■□□□□ 0.36
CAPNS1P04632 HLA-J-203ENST00000494367 1087 ntBASIC17.31■□□□□ 0.36
CAPNS1P04632 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.31■□□□□ 0.36
CAPNS1P04632 UNC93B6-202ENST00000528242 690 ntBASIC17.31■□□□□ 0.36
CAPNS1P04632 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CAPNS1P04632 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.31■□□□□ 0.36
CAPNS1P04632 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPNS1P04632 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.31■□□□□ 0.36
CAPNS1P04632 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.31■□□□□ 0.36
CAPNS1P04632 AC005336.2-201ENST00000593183 939 ntBASIC17.31■□□□□ 0.36
CAPNS1P04632 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPNS1P04632 AL596442.2-201ENST00000610240 980 ntBASIC17.31■□□□□ 0.36
CAPNS1P04632 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPNS1P04632 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPNS1P04632 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPNS1P04632 AP005117.1-201ENST00000584346 1413 ntBASIC17.3■□□□□ 0.36
CAPNS1P04632 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CAPNS1P04632 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CAPNS1P04632 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPNS1P04632 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CAPNS1P04632 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPNS1P04632 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CAPNS1P04632 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.3■□□□□ 0.36
CAPNS1P04632 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CAPNS1P04632 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.3■□□□□ 0.36
CAPNS1P04632 AL645939.2-201ENST00000427340 991 ntBASIC17.3■□□□□ 0.36
CAPNS1P04632 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPNS1P04632 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.3■□□□□ 0.36
CAPNS1P04632 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.3■□□□□ 0.36
CAPNS1P04632 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.3■□□□□ 0.36
CAPNS1P04632 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPNS1P04632 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.3■□□□□ 0.36
CAPNS1P04632 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPNS1P04632 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.3■□□□□ 0.36
CAPNS1P04632 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.3■□□□□ 0.36
CAPNS1P04632 AC018695.7-201ENST00000624587 2492 ntBASIC17.3■□□□□ 0.36
CAPNS1P04632 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.3■□□□□ 0.36
CAPNS1P04632 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.3■□□□□ 0.36
CAPNS1P04632 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CAPNS1P04632 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CAPNS1P04632 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 AC090340.1-201ENST00000620778 4980 ntBASIC17.29■□□□□ 0.36
CAPNS1P04632 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CAPNS1P04632 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPNS1P04632 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPNS1P04632 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.29■□□□□ 0.36
CAPNS1P04632 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 AC046158.3-201ENST00000624947 2558 ntBASIC17.29■□□□□ 0.36
CAPNS1P04632 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPNS1P04632 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPNS1P04632 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CAPNS1P04632 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPNS1P04632 AC023274.1-201ENST00000418278 595 ntBASIC17.29■□□□□ 0.36
CAPNS1P04632 HLA-J-202ENST00000469281 1241 ntBASIC17.29■□□□□ 0.36
CAPNS1P04632 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.29■□□□□ 0.36
CAPNS1P04632 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPNS1P04632 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.29■□□□□ 0.36
CAPNS1P04632 OR7E14P-202ENST00000530490 1290 ntBASIC17.29■□□□□ 0.36
CAPNS1P04632 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
CAPNS1P04632 AC009533.2-201ENST00000543664 586 ntBASIC17.29■□□□□ 0.36
CAPNS1P04632 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.29■□□□□ 0.36
CAPNS1P04632 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPNS1P04632 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.29■□□□□ 0.36
CAPNS1P04632 AC025062.2-201ENST00000605477 670 ntBASIC17.29■□□□□ 0.36
CAPNS1P04632 AC008735.5-201ENST00000623544 497 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms