Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KRT6AP02538 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KRT6AP02538 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
KRT6AP02538 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT6AP02538 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6AP02538 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
KRT6AP02538 FAM220CP-201ENST00000395253 831 ntBASIC16.87■□□□□ 0.29
KRT6AP02538 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6AP02538 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 AL138831.2-201ENST00000606564 490 ntBASIC16.87■□□□□ 0.29
KRT6AP02538 AC019129.2-201ENST00000609837 1235 ntBASIC16.87■□□□□ 0.29
KRT6AP02538 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT6AP02538 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KRT6AP02538 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6AP02538 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KRT6AP02538 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT6AP02538 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT6AP02538 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT6AP02538 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
KRT6AP02538 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KRT6AP02538 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6AP02538 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT6AP02538 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.87■□□□□ 0.29
KRT6AP02538 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT6AP02538 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT6AP02538 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT6AP02538 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT6AP02538 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT6AP02538 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.86■□□□□ 0.29
KRT6AP02538 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
KRT6AP02538 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.86■□□□□ 0.29
KRT6AP02538 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
KRT6AP02538 AC246785.2-201ENST00000432512 513 ntBASIC16.86■□□□□ 0.29
KRT6AP02538 VENTXP7-201ENST00000475503 772 ntBASIC16.86■□□□□ 0.29
KRT6AP02538 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT6AP02538 AL121956.5-201ENST00000625261 221 ntBASIC16.86■□□□□ 0.29
KRT6AP02538 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.86■□□□□ 0.29
KRT6AP02538 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.86■□□□□ 0.29
KRT6AP02538 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
KRT6AP02538 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
KRT6AP02538 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
KRT6AP02538 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
KRT6AP02538 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
KRT6AP02538 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
KRT6AP02538 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
KRT6AP02538 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT6AP02538 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT6AP02538 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.85■□□□□ 0.29
KRT6AP02538 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT6AP02538 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms