Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ZBED1O96006 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.4■□□□□ 0.54
ZBED1O96006 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ZBED1O96006 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZBED1O96006 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZBED1O96006 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.39■□□□□ 0.54
ZBED1O96006 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZBED1O96006 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZBED1O96006 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
ZBED1O96006 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.39■□□□□ 0.53
ZBED1O96006 KLF4P1-201ENST00000412782 1185 ntBASIC18.39■□□□□ 0.53
ZBED1O96006 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 AL020989.1-201ENST00000422979 469 ntBASIC18.39■□□□□ 0.53
ZBED1O96006 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 AP002469.2-201ENST00000531724 424 ntBASIC18.39■□□□□ 0.53
ZBED1O96006 SART3-203ENST00000546611 1184 ntBASIC18.39■□□□□ 0.53
ZBED1O96006 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.39■□□□□ 0.53
ZBED1O96006 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.39■□□□□ 0.53
ZBED1O96006 NKAPP1-205ENST00000585790 367 ntBASIC18.39■□□□□ 0.53
ZBED1O96006 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.39■□□□□ 0.53
ZBED1O96006 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.39■□□□□ 0.53
ZBED1O96006 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.39■□□□□ 0.53
ZBED1O96006 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
ZBED1O96006 SIGLEC16-201ENST00000599858 1437 ntBASIC18.39■□□□□ 0.53
ZBED1O96006 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZBED1O96006 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.38■□□□□ 0.53
ZBED1O96006 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.38■□□□□ 0.53
ZBED1O96006 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.38■□□□□ 0.53
ZBED1O96006 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.38■□□□□ 0.53
ZBED1O96006 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 FAM197Y8-203ENST00000450145 560 ntBASIC18.38■□□□□ 0.53
ZBED1O96006 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.38■□□□□ 0.53
ZBED1O96006 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 STK19B-204ENST00000512515 211 ntBASIC18.38■□□□□ 0.53
ZBED1O96006 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.38■□□□□ 0.53
ZBED1O96006 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.38■□□□□ 0.53
ZBED1O96006 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.38■□□□□ 0.53
ZBED1O96006 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.38■□□□□ 0.53
ZBED1O96006 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ZBED1O96006 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
ZBED1O96006 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZBED1O96006 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.38■□□□□ 0.53
ZBED1O96006 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZBED1O96006 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.37■□□□□ 0.53
ZBED1O96006 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.37■□□□□ 0.53
ZBED1O96006 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.37■□□□□ 0.53
ZBED1O96006 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ZBED1O96006 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZBED1O96006 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.37■□□□□ 0.53
ZBED1O96006 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ZBED1O96006 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.37■□□□□ 0.53
ZBED1O96006 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZBED1O96006 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.37■□□□□ 0.53
ZBED1O96006 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.37■□□□□ 0.53
ZBED1O96006 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZBED1O96006 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZBED1O96006 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.37■□□□□ 0.53
ZBED1O96006 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.37■□□□□ 0.53
ZBED1O96006 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.37■□□□□ 0.53
ZBED1O96006 AC026396.1-201ENST00000419388 421 ntBASIC18.37■□□□□ 0.53
ZBED1O96006 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.37■□□□□ 0.53
ZBED1O96006 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ZBED1O96006 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ZBED1O96006 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.37■□□□□ 0.53
ZBED1O96006 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.37■□□□□ 0.53
ZBED1O96006 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.37■□□□□ 0.53
ZBED1O96006 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZBED1O96006 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZBED1O96006 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
ZBED1O96006 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms