Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.79■□□□□ 0.28
SEC22BO75396 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.79■□□□□ 0.28
SEC22BO75396 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 MYCLP1-201ENST00000372451 1075 ntBASIC16.79■□□□□ 0.28
SEC22BO75396 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.79■□□□□ 0.28
SEC22BO75396 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 AC109462.3-201ENST00000573934 613 ntBASIC16.79■□□□□ 0.28
SEC22BO75396 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SEC22BO75396 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SEC22BO75396 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.79■□□□□ 0.28
SEC22BO75396 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SEC22BO75396 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.79■□□□□ 0.28
SEC22BO75396 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC22BO75396 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.78■□□□□ 0.28
SEC22BO75396 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEC22BO75396 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.78■□□□□ 0.28
SEC22BO75396 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.78■□□□□ 0.28
SEC22BO75396 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SEC22BO75396 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.78■□□□□ 0.28
SEC22BO75396 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SEC22BO75396 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SEC22BO75396 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEC22BO75396 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 RN7SL606P-201ENST00000472779 293 ntBASIC16.78■□□□□ 0.28
SEC22BO75396 DUX4L26-201ENST00000489078 1255 ntBASIC16.78■□□□□ 0.28
SEC22BO75396 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.78■□□□□ 0.28
SEC22BO75396 RN7SL850P-201ENST00000579959 291 ntBASIC16.78■□□□□ 0.28
SEC22BO75396 IGHV3-41-201ENST00000613121 348 ntBASIC16.78■□□□□ 0.28
SEC22BO75396 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.78■□□□□ 0.28
SEC22BO75396 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
SEC22BO75396 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEC22BO75396 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.78■□□□□ 0.28
SEC22BO75396 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEC22BO75396 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.78■□□□□ 0.28
SEC22BO75396 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SEC22BO75396 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
SEC22BO75396 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.77■□□□□ 0.28
SEC22BO75396 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.77■□□□□ 0.28
SEC22BO75396 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.77■□□□□ 0.28
SEC22BO75396 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
SEC22BO75396 AC106886.4-201ENST00000623557 2502 ntBASIC16.77■□□□□ 0.28
SEC22BO75396 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.28
SEC22BO75396 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SEC22BO75396 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC22BO75396 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC22BO75396 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC22BO75396 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC22BO75396 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC22BO75396 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC22BO75396 AC125634.1-201ENST00000438758 1403 ntBASIC16.77■□□□□ 0.27
SEC22BO75396 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC22BO75396 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC22BO75396 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
SEC22BO75396 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SEC22BO75396 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.77■□□□□ 0.27
SEC22BO75396 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SEC22BO75396 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms