Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL118508.1-201ENST00000613502 2345 ntBASIC16.27■□□□□ 0.19
TRIM3O75382 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM3O75382 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRIM3O75382 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM3O75382 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM3O75382 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 AC080080.1-201ENST00000625121 2420 ntBASIC16.26■□□□□ 0.19
TRIM3O75382 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TRIM3O75382 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TRIM3O75382 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 AC004870.1-201ENST00000315132 882 ntBASIC16.26■□□□□ 0.19
TRIM3O75382 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM3O75382 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
TRIM3O75382 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
TRIM3O75382 AC096633.1-201ENST00000422446 749 ntBASIC16.26■□□□□ 0.19
TRIM3O75382 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM3O75382 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM3O75382 FAAHP1-202ENST00000446499 1238 ntBASIC16.26■□□□□ 0.19
TRIM3O75382 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.26■□□□□ 0.19
TRIM3O75382 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM3O75382 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM3O75382 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.26■□□□□ 0.19
TRIM3O75382 AL591684.3-201ENST00000605187 298 ntBASIC16.26■□□□□ 0.19
TRIM3O75382 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM3O75382 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM3O75382 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRIM3O75382 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM3O75382 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM3O75382 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM3O75382 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TRIM3O75382 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRIM3O75382 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM3O75382 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM3O75382 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
TRIM3O75382 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM3O75382 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM3O75382 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM3O75382 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM3O75382 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRIM3O75382 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TRIM3O75382 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM3O75382 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM3O75382 EMBP1-201ENST00000458200 901 ntBASIC16.25■□□□□ 0.19
TRIM3O75382 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM3O75382 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM3O75382 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRIM3O75382 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRIM3O75382 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM3O75382 INTS4P1-201ENST00000438455 1935 ntBASIC16.25■□□□□ 0.19
TRIM3O75382 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM3O75382 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRIM3O75382 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM3O75382 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM3O75382 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.24■□□□□ 0.19
TRIM3O75382 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.24■□□□□ 0.19
TRIM3O75382 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM3O75382 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRIM3O75382 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM3O75382 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM3O75382 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRIM3O75382 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM3O75382 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRIM3O75382 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM3O75382 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms