Protein–RNA interactions for Protein: O75339

CILP, Cartilage intermediate layer protein 1, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CILPO75339 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.41■□□□□ 0.54
CILPO75339 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.41■□□□□ 0.54
CILPO75339 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.41■□□□□ 0.54
CILPO75339 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.41■□□□□ 0.54
CILPO75339 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CILPO75339 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CILPO75339 AL031284.1-201ENST00000419297 478 ntBASIC18.41■□□□□ 0.54
CILPO75339 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.41■□□□□ 0.54
CILPO75339 KRT18P27-201ENST00000427733 1299 ntBASIC18.41■□□□□ 0.54
CILPO75339 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CILPO75339 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.41■□□□□ 0.54
CILPO75339 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CILPO75339 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.41■□□□□ 0.54
CILPO75339 AL662844.1-201ENST00000546340 181 ntBASIC18.41■□□□□ 0.54
CILPO75339 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.41■□□□□ 0.54
CILPO75339 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CILPO75339 AC008735.5-201ENST00000623544 497 ntBASIC18.41■□□□□ 0.54
CILPO75339 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CILPO75339 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CILPO75339 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CILPO75339 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.4■□□□□ 0.54
CILPO75339 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CILPO75339 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.4■□□□□ 0.54
CILPO75339 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.4■□□□□ 0.54
CILPO75339 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.4■□□□□ 0.54
CILPO75339 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.4■□□□□ 0.54
CILPO75339 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.4■□□□□ 0.54
CILPO75339 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.4■□□□□ 0.54
CILPO75339 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.4■□□□□ 0.54
CILPO75339 AC006557.2-201ENST00000592985 1240 ntBASIC18.4■□□□□ 0.54
CILPO75339 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.4■□□□□ 0.54
CILPO75339 MIR7706-201ENST00000613747 67 ntBASIC18.4■□□□□ 0.54
CILPO75339 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CILPO75339 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CILPO75339 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CILPO75339 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CILPO75339 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CILPO75339 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CILPO75339 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.39■□□□□ 0.53
CILPO75339 EGFEM1P-202ENST00000431685 1563 ntBASIC18.39■□□□□ 0.53
CILPO75339 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CILPO75339 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CILPO75339 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CILPO75339 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.39■□□□□ 0.53
CILPO75339 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CILPO75339 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CILPO75339 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.39■□□□□ 0.53
CILPO75339 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.39■□□□□ 0.53
CILPO75339 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.39■□□□□ 0.53
CILPO75339 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 AC012640.2-201ENST00000561606 901 ntBASIC18.39■□□□□ 0.53
CILPO75339 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.39■□□□□ 0.53
CILPO75339 AL049840.3-201ENST00000602669 611 ntBASIC18.39■□□□□ 0.53
CILPO75339 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CILPO75339 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 HLA-A-201ENST00000376802 1334 ntBASIC18.39■□□□□ 0.53
CILPO75339 AL590787.1-201ENST00000568856 1315 ntBASIC18.39■□□□□ 0.53
CILPO75339 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CILPO75339 FZD10-202ENST00000539839 3282 ntBASIC18.39■□□□□ 0.53
CILPO75339 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CILPO75339 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CILPO75339 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CILPO75339 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.38■□□□□ 0.53
CILPO75339 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CILPO75339 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CILPO75339 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CILPO75339 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CILPO75339 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms