Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNRC18O15417 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNRC18O15417 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TNRC18O15417 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.61■□□□□ 0.57
TNRC18O15417 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.61■□□□□ 0.57
TNRC18O15417 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.61■□□□□ 0.57
TNRC18O15417 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.61■□□□□ 0.57
TNRC18O15417 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNRC18O15417 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TNRC18O15417 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TNRC18O15417 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNRC18O15417 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNRC18O15417 KRT18P34-201ENST00000488218 1270 ntBASIC18.61■□□□□ 0.57
TNRC18O15417 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.61■□□□□ 0.57
TNRC18O15417 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.61■□□□□ 0.57
TNRC18O15417 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TNRC18O15417 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNRC18O15417 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNRC18O15417 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNRC18O15417 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNRC18O15417 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNRC18O15417 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.6■□□□□ 0.57
TNRC18O15417 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.6■□□□□ 0.57
TNRC18O15417 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.6■□□□□ 0.57
TNRC18O15417 EIF4HP1-201ENST00000453115 687 ntBASIC18.6■□□□□ 0.57
TNRC18O15417 RPL13AP20-201ENST00000459725 609 ntBASIC18.6■□□□□ 0.57
TNRC18O15417 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.6■□□□□ 0.57
TNRC18O15417 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TNRC18O15417 MIR4515-201ENST00000584082 81 ntBASIC18.6■□□□□ 0.57
TNRC18O15417 MIR8072-201ENST00000614241 80 ntBASIC18.6■□□□□ 0.57
TNRC18O15417 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNRC18O15417 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.6■□□□□ 0.57
TNRC18O15417 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.6■□□□□ 0.57
TNRC18O15417 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TNRC18O15417 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TNRC18O15417 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.6■□□□□ 0.57
TNRC18O15417 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.6■□□□□ 0.57
TNRC18O15417 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNRC18O15417 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TNRC18O15417 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.6■□□□□ 0.57
TNRC18O15417 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.6■□□□□ 0.57
TNRC18O15417 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNRC18O15417 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.6■□□□□ 0.57
TNRC18O15417 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNRC18O15417 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TNRC18O15417 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNRC18O15417 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNRC18O15417 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TNRC18O15417 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNRC18O15417 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNRC18O15417 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.6■□□□□ 0.57
TNRC18O15417 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TNRC18O15417 KLF2P4-201ENST00000451959 1225 ntBASIC18.6■□□□□ 0.57
TNRC18O15417 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.6■□□□□ 0.57
TNRC18O15417 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.6■□□□□ 0.57
TNRC18O15417 WFDC1-204ENST00000613603 549 ntBASIC18.6■□□□□ 0.57
TNRC18O15417 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 BOLA2P3-201ENST00000404566 256 ntBASIC18.59■□□□□ 0.57
TNRC18O15417 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.59■□□□□ 0.57
TNRC18O15417 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.59■□□□□ 0.57
TNRC18O15417 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.59■□□□□ 0.57
TNRC18O15417 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.59■□□□□ 0.57
TNRC18O15417 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.59■□□□□ 0.57
TNRC18O15417 AC009542.2-202ENST00000619004 1067 ntBASIC18.59■□□□□ 0.57
TNRC18O15417 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TNRC18O15417 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TNRC18O15417 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 AL049812.1-201ENST00000432563 2267 ntBASIC18.59■□□□□ 0.57
TNRC18O15417 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TNRC18O15417 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.59■□□□□ 0.57
TNRC18O15417 AL589739.1-201ENST00000607720 493 ntBASIC18.59■□□□□ 0.57
TNRC18O15417 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TNRC18O15417 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNRC18O15417 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNRC18O15417 ESPNP-201ENST00000270691 2015 ntBASIC18.58■□□□□ 0.57
TNRC18O15417 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TNRC18O15417 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.58■□□□□ 0.57
TNRC18O15417 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.58■□□□□ 0.57
TNRC18O15417 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNRC18O15417 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNRC18O15417 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNRC18O15417 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TNRC18O15417 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TNRC18O15417 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
TNRC18O15417 RPL7P3-201ENST00000441388 714 ntBASIC18.58■□□□□ 0.56
TNRC18O15417 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNRC18O15417 AC055876.2-201ENST00000531834 546 ntBASIC18.58■□□□□ 0.56
TNRC18O15417 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
TNRC18O15417 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.58■□□□□ 0.56
TNRC18O15417 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms