Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SOX1O00570 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SOX1O00570 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SOX1O00570 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX1O00570 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.32■□□□□ 0.52
SOX1O00570 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX1O00570 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SOX1O00570 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX1O00570 AC099548.2-209ENST00000480264 625 ntBASIC18.32■□□□□ 0.52
SOX1O00570 RNA5SP423-201ENST00000517127 109 ntBASIC18.32■□□□□ 0.52
SOX1O00570 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SOX1O00570 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SOX1O00570 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SOX1O00570 AC103810.3-201ENST00000583567 96 ntBASIC18.32■□□□□ 0.52
SOX1O00570 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.32■□□□□ 0.52
SOX1O00570 AC004790.1-201ENST00000612686 536 ntBASIC18.32■□□□□ 0.52
SOX1O00570 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.32■□□□□ 0.52
SOX1O00570 AC125437.2-201ENST00000625180 2167 ntBASIC18.32■□□□□ 0.52
SOX1O00570 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX1O00570 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX1O00570 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX1O00570 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SOX1O00570 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SOX1O00570 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SOX1O00570 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX1O00570 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.31■□□□□ 0.52
SOX1O00570 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.31■□□□□ 0.52
SOX1O00570 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.31■□□□□ 0.52
SOX1O00570 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.31■□□□□ 0.52
SOX1O00570 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.31■□□□□ 0.52
SOX1O00570 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SOX1O00570 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SOX1O00570 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
SOX1O00570 AC087499.6-201ENST00000411576 835 ntBASIC18.31■□□□□ 0.52
SOX1O00570 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.31■□□□□ 0.52
SOX1O00570 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.31■□□□□ 0.52
SOX1O00570 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.31■□□□□ 0.52
SOX1O00570 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.31■□□□□ 0.52
SOX1O00570 AC018529.1-201ENST00000613063 361 ntBASIC18.31■□□□□ 0.52
SOX1O00570 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.31■□□□□ 0.52
SOX1O00570 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SOX1O00570 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.31■□□□□ 0.52
SOX1O00570 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX1O00570 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SOX1O00570 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SOX1O00570 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX1O00570 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX1O00570 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX1O00570 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX1O00570 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX1O00570 CROCCP4-201ENST00000457096 498 ntBASIC18.3■□□□□ 0.52
SOX1O00570 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SOX1O00570 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX1O00570 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX1O00570 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.3■□□□□ 0.52
SOX1O00570 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SOX1O00570 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.3■□□□□ 0.52
SOX1O00570 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX1O00570 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.3■□□□□ 0.52
SOX1O00570 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SOX1O00570 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.3■□□□□ 0.52
SOX1O00570 AC007431.3-201ENST00000623221 587 ntBASIC18.3■□□□□ 0.52
SOX1O00570 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.3■□□□□ 0.52
SOX1O00570 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.3■□□□□ 0.52
SOX1O00570 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.3■□□□□ 0.52
SOX1O00570 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.3■□□□□ 0.52
SOX1O00570 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX1O00570 AL391825.1-201ENST00000457671 1364 ntBASIC18.3■□□□□ 0.52
SOX1O00570 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX1O00570 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX1O00570 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX1O00570 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX1O00570 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SOX1O00570 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX1O00570 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX1O00570 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX1O00570 AC087499.5-201ENST00000452760 1342 ntBASIC18.29■□□□□ 0.52
SOX1O00570 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms