Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC7O00311 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.07■□□□□ 0.32
CDC7O00311 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 ARMC10P1-201ENST00000313754 855 ntBASIC17.07■□□□□ 0.32
CDC7O00311 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.07■□□□□ 0.32
CDC7O00311 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CDC7O00311 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 RCN1P2-201ENST00000398357 915 ntBASIC17.07■□□□□ 0.32
CDC7O00311 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC7O00311 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC7O00311 AC096582.2-201ENST00000510860 516 ntBASIC17.07■□□□□ 0.32
CDC7O00311 AC074051.2-201ENST00000565115 352 ntBASIC17.07■□□□□ 0.32
CDC7O00311 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.07■□□□□ 0.32
CDC7O00311 AC010331.1-201ENST00000611423 582 ntBASIC17.07■□□□□ 0.32
CDC7O00311 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC7O00311 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC7O00311 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDC7O00311 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDC7O00311 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDC7O00311 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CDC7O00311 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC7O00311 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CDC7O00311 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CDC7O00311 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC7O00311 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDC7O00311 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC7O00311 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC7O00311 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC7O00311 INTS4P1-201ENST00000438455 1935 ntBASIC17.06■□□□□ 0.32
CDC7O00311 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC7O00311 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC7O00311 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDC7O00311 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC7O00311 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC7O00311 AP000867.3-201ENST00000524675 377 ntBASIC17.06■□□□□ 0.32
CDC7O00311 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.06■□□□□ 0.32
CDC7O00311 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC7O00311 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.06■□□□□ 0.32
CDC7O00311 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC7O00311 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDC7O00311 AC069148.1-201ENST00000608741 768 ntBASIC17.06■□□□□ 0.32
CDC7O00311 AC092119.3-201ENST00000612618 583 ntBASIC17.06■□□□□ 0.32
CDC7O00311 AD001527.2-201ENST00000622994 785 ntBASIC17.06■□□□□ 0.32
CDC7O00311 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CDC7O00311 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDC7O00311 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDC7O00311 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC7O00311 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC7O00311 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDC7O00311 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC7O00311 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC7O00311 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC7O00311 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC7O00311 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC7O00311 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC7O00311 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC7O00311 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CDC7O00311 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC7O00311 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDC7O00311 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDC7O00311 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC7O00311 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC7O00311 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC7O00311 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDC7O00311 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC7O00311 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CDC7O00311 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CDC7O00311 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CDC7O00311 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms