Protein–RNA interactions for Protein: O00231

PSMD11, 26S proteasome non-ATPase regulatory subunit 11, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11O00231 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PSMD11O00231 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.4■□□□□ 0.38
PSMD11O00231 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
PSMD11O00231 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.39■□□□□ 0.37
PSMD11O00231 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PSMD11O00231 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.39■□□□□ 0.37
PSMD11O00231 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.39■□□□□ 0.37
PSMD11O00231 RPS2P1-201ENST00000434010 821 ntBASIC17.39■□□□□ 0.37
PSMD11O00231 HNRNPDP1-201ENST00000439535 754 ntBASIC17.39■□□□□ 0.37
PSMD11O00231 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.39■□□□□ 0.37
PSMD11O00231 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.39■□□□□ 0.37
PSMD11O00231 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.39■□□□□ 0.37
PSMD11O00231 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 FAM215A-202ENST00000632077 792 ntBASIC17.39■□□□□ 0.37
PSMD11O00231 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.39■□□□□ 0.37
PSMD11O00231 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PSMD11O00231 AC046185.3-201ENST00000623228 1824 ntBASIC17.39■□□□□ 0.37
PSMD11O00231 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PSMD11O00231 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PSMD11O00231 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PSMD11O00231 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PSMD11O00231 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.39■□□□□ 0.37
PSMD11O00231 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.39■□□□□ 0.37
PSMD11O00231 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.39■□□□□ 0.37
PSMD11O00231 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.39■□□□□ 0.37
PSMD11O00231 NCF1C-201ENST00000438382 1427 ntBASIC17.38■□□□□ 0.37
PSMD11O00231 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.38■□□□□ 0.37
PSMD11O00231 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.38■□□□□ 0.37
PSMD11O00231 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PSMD11O00231 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.38■□□□□ 0.37
PSMD11O00231 AC139887.3-201ENST00000568585 713 ntBASIC17.38■□□□□ 0.37
PSMD11O00231 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.38■□□□□ 0.37
PSMD11O00231 AC006557.2-201ENST00000592985 1240 ntBASIC17.38■□□□□ 0.37
PSMD11O00231 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.38■□□□□ 0.37
PSMD11O00231 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.38■□□□□ 0.37
PSMD11O00231 AC008735.5-201ENST00000623544 497 ntBASIC17.38■□□□□ 0.37
PSMD11O00231 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.38■□□□□ 0.37
PSMD11O00231 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
PSMD11O00231 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PSMD11O00231 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PSMD11O00231 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.38■□□□□ 0.37
PSMD11O00231 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PSMD11O00231 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.38■□□□□ 0.37
PSMD11O00231 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PSMD11O00231 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PSMD11O00231 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PSMD11O00231 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.37■□□□□ 0.37
PSMD11O00231 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PSMD11O00231 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.37■□□□□ 0.37
PSMD11O00231 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PSMD11O00231 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.37■□□□□ 0.37
PSMD11O00231 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms