Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 AC141586.5-201ENST00000624546 2050 ntBASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SMIM9A6NGZ8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 EMBP1-201ENST00000458200 901 ntBASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 AC073648.2-201ENST00000510116 352 ntBASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 AL022326.1-202ENST00000641533 845 ntBASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 AC007613.1-201ENST00000572811 2597 ntBASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 AC016396.2-201ENST00000562575 1417 ntBASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 AC012317.2-201ENST00000623305 2251 ntBASIC12.62□□□□□ -0.39
SMIM9A6NGZ8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 AC132938.5-201ENST00000624980 1813 ntBASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 AKR1C7P-201ENST00000305623 895 ntBASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 FGFR3P6-201ENST00000457012 610 ntBASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 AF186996.4-201ENST00000467186 377 ntBASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 AF238378.1-201ENST00000526806 358 ntBASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 AL662844.1-201ENST00000546340 181 ntBASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM9A6NGZ8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms