Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 AC005104.2-201ENST00000427818 678 ntBASIC17.65■□□□□ 0.42
CCDC78A2IDD5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 AL353801.3-201ENST00000609898 542 ntBASIC17.65■□□□□ 0.42
CCDC78A2IDD5 AC092119.3-201ENST00000612618 583 ntBASIC17.65■□□□□ 0.42
CCDC78A2IDD5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 AC009053.2-201ENST00000563701 2365 ntBASIC17.65■□□□□ 0.42
CCDC78A2IDD5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC78A2IDD5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC78A2IDD5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC78A2IDD5 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC78A2IDD5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 VENTXP7-201ENST00000475503 772 ntBASIC17.64■□□□□ 0.41
CCDC78A2IDD5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 AC019129.2-201ENST00000609837 1235 ntBASIC17.64■□□□□ 0.41
CCDC78A2IDD5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 AC079328.2-201ENST00000561241 3354 ntBASIC17.64■□□□□ 0.41
CCDC78A2IDD5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 AC097374.2-201ENST00000618617 1306 ntBASIC17.64■□□□□ 0.41
CCDC78A2IDD5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC78A2IDD5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 AP000867.3-201ENST00000524675 377 ntBASIC17.63■□□□□ 0.41
CCDC78A2IDD5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 AC069148.1-201ENST00000608741 768 ntBASIC17.63■□□□□ 0.41
CCDC78A2IDD5 AL139327.4-201ENST00000612362 153 ntBASIC17.63■□□□□ 0.41
CCDC78A2IDD5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC78A2IDD5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC78A2IDD5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms