Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHB11Q9Y5F2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 SIRPAP1-201ENST00000448467 1770 ntBASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 AC103564.2-201ENST00000432853 1299 ntBASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 AC116407.3-201ENST00000623905 1129 ntBASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB11Q9Y5F2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 ABCD1P5-201ENST00000445663 754 ntBASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 AP001269.4-201ENST00000609611 512 ntBASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 MIR7706-201ENST00000613747 67 ntBASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 LINC01451-201ENST00000623792 534 ntBASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 AL645608.8-201ENST00000606034 2086 ntBASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHB11Q9Y5F2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 AL049840.3-201ENST00000602669 611 ntBASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHB11Q9Y5F2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms