Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
YIPF1Q9Y548 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YIPF1Q9Y548 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 SLC25A6P5-201ENST00000435663 894 ntBASIC18.09■□□□□ 0.49
YIPF1Q9Y548 FAM58CP-201ENST00000435741 640 ntBASIC18.09■□□□□ 0.49
YIPF1Q9Y548 CEND1P1-201ENST00000451006 455 ntBASIC18.09■□□□□ 0.49
YIPF1Q9Y548 AC087163.2-201ENST00000457299 853 ntBASIC18.09■□□□□ 0.49
YIPF1Q9Y548 AC074386.1-202ENST00000463561 864 ntBASIC18.09■□□□□ 0.49
YIPF1Q9Y548 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 SNHG9-202ENST00000564014 471 ntBASIC18.09■□□□□ 0.49
YIPF1Q9Y548 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
YIPF1Q9Y548 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.08■□□□□ 0.49
YIPF1Q9Y548 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 AC254562.1-201ENST00000417586 456 ntBASIC18.08■□□□□ 0.48
YIPF1Q9Y548 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 FAM185BP-201ENST00000443595 716 ntBASIC18.08■□□□□ 0.48
YIPF1Q9Y548 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 ACTL9-202ENST00000612068 1252 ntBASIC18.08■□□□□ 0.48
YIPF1Q9Y548 AL355312.1-201ENST00000407115 2176 ntBASIC18.08■□□□□ 0.48
YIPF1Q9Y548 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
YIPF1Q9Y548 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 AL031432.2-201ENST00000566714 459 ntBASIC18.07■□□□□ 0.48
YIPF1Q9Y548 AL928711.1-201ENST00000570165 459 ntBASIC18.07■□□□□ 0.48
YIPF1Q9Y548 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.07■□□□□ 0.48
YIPF1Q9Y548 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
YIPF1Q9Y548 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YIPF1Q9Y548 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YIPF1Q9Y548 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.06■□□□□ 0.48
YIPF1Q9Y548 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.06■□□□□ 0.48
YIPF1Q9Y548 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YIPF1Q9Y548 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YIPF1Q9Y548 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms