Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 RNA5SP416-201ENST00000516838 111 ntBASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 AL355312.1-201ENST00000407115 2176 ntBASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 AL135999.2-201ENST00000622438 1686 ntBASIC11.91□□□□□ -0.5
LINC00588Q9Y4M8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 GPR89P-201ENST00000407924 1495 ntBASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 PTCHD3P3-201ENST00000403073 906 ntBASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 ACTG1P4-201ENST00000425123 1122 ntBASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 AC108073.2-201ENST00000464002 357 ntBASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 AC092865.5-201ENST00000545435 363 ntBASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 MIR4751-201ENST00000578027 74 ntBASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 AC008667.4-201ENST00000607370 168 ntBASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 AL805961.1-202ENST00000641562 540 ntBASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00588Q9Y4M8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LINC00588Q9Y4M8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms