Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL390754.1-201ENST00000619088 582 ntBASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 KRT18P55-202ENST00000578578 1546 ntBASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 WIZP1-201ENST00000531444 2299 ntBASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RTCBQ9Y3I0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 GAPDHP21-201ENST00000450301 1010 ntBASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 LINC01225-203ENST00000563550 1244 ntBASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RTCBQ9Y3I0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RTCBQ9Y3I0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RTCBQ9Y3I0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 UXT-AS1-201ENST00000590504 1525 ntBASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 HMGA1P7-201ENST00000406908 502 ntBASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 SPDYE7P-202ENST00000420373 878 ntBASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 KRT8P23-201ENST00000560090 1207 ntBASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.76■■□□□ 1.07
RTCBQ9Y3I0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 SPDYE14P-201ENST00000442619 822 ntBASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RTCBQ9Y3I0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 AL158211.3-201ENST00000607385 239 ntBASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTCBQ9Y3I0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTCBQ9Y3I0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTCBQ9Y3I0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms