Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 AL359075.1-203ENST00000462729 1002 ntBASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 KRT18P21-201ENST00000515767 1272 ntBASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 ZNF444P1-201ENST00000559497 298 ntBASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 AC093010.1-201ENST00000473625 1624 ntBASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 PCDHB17P-201ENST00000539533 2393 ntBASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 SPDYE15P-201ENST00000424157 909 ntBASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 KRT18P48-201ENST00000434763 852 ntBASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 AC063952.2-201ENST00000498792 1227 ntBASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 AC079602.3-201ENST00000623931 403 ntBASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 KRT89P-201ENST00000620027 1478 ntBASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HHLA3Q9XRX5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HHLA3Q9XRX5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.77□□□□□ -0.36
HHLA3Q9XRX5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
HHLA3Q9XRX5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HHLA3Q9XRX5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HHLA3Q9XRX5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
HHLA3Q9XRX5 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HHLA3Q9XRX5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
HHLA3Q9XRX5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.77□□□□□ -0.36
HHLA3Q9XRX5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
HHLA3Q9XRX5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 AC112907.2-201ENST00000448639 330 ntBASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 DUX4L26-201ENST00000489078 1255 ntBASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 AC113404.2-201ENST00000507884 177 ntBASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 AC022898.2-201ENST00000616822 1312 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms