Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 AC254562.1-201ENST00000417586 456 ntBASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 AC005412.3-201ENST00000580309 715 ntBASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 AC068137.2-201ENST00000605408 478 ntBASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SYNPO2Q9UMS6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 AL513480.1-201ENST00000451731 511 ntBASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 MIR4469-201ENST00000583919 79 ntBASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.89■□□□□ 0.77
SYNPO2Q9UMS6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SYNPO2Q9UMS6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 AP002472.1-201ENST00000577490 586 ntBASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 AC093525.9-201ENST00000624961 1746 ntBASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNPO2Q9UMS6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 NOC2LP2-201ENST00000407594 1944 ntBASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNPO2Q9UMS6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms