Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 DDX43P3-201ENST00000441064 443 ntBASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLIP2Q9UDT6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLIP2Q9UDT6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLIP2Q9UDT6 BX276092.7-203ENST00000637198 1536 ntBASIC20.64■□□□□ 0.9
CLIP2Q9UDT6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CLIP2Q9UDT6 AL353593.2-201ENST00000602529 1483 ntBASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 SLC25A1P1-201ENST00000528351 927 ntBASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 AC012640.2-201ENST00000561606 901 ntBASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.64■□□□□ 0.89
CLIP2Q9UDT6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 AC132938.5-201ENST00000624980 1813 ntBASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 SPDYE21P-201ENST00000413323 827 ntBASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 AC109462.3-201ENST00000573934 613 ntBASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 AC019129.2-201ENST00000609837 1235 ntBASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 AC073592.4-201ENST00000623827 446 ntBASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIP2Q9UDT6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIP2Q9UDT6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms