Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC1R1Q9NWW0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC1R1Q9NWW0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC1R1Q9NWW0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
HCFC1R1Q9NWW0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC1R1Q9NWW0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HCFC1R1Q9NWW0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 ABALON-201ENST00000629058 1903 ntBASIC17.96■□□□□ 0.47
HCFC1R1Q9NWW0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.96■□□□□ 0.46
HCFC1R1Q9NWW0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.96■□□□□ 0.46
HCFC1R1Q9NWW0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
HCFC1R1Q9NWW0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 ADH5P3-201ENST00000433842 1137 ntBASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 AC109322.1-201ENST00000524499 1264 ntBASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 AC093512.1-201ENST00000617969 520 ntBASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HCFC1R1Q9NWW0 AL121761.2-201ENST00000598007 1648 ntBASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 AC112191.1-201ENST00000523689 701 ntBASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HCFC1R1Q9NWW0 AC012317.2-201ENST00000623305 2251 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms