Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXD4L1Q9NU39 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.02■□□□□ 0.95
FOXD4L1Q9NU39 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
FOXD4L1Q9NU39 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
FOXD4L1Q9NU39 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
FOXD4L1Q9NU39 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
FOXD4L1Q9NU39 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 EAF2-202ENST00000451944 960 ntTSL 2 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 CAB39P1-201ENST00000502277 460 ntBASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 AC023968.2-201ENST00000560593 1049 ntBASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 C2orf69P3-201ENST00000565542 1120 ntBASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 FLJ38576-201ENST00000623820 2459 ntBASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXD4L1Q9NU39 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 AC105020.1-201ENST00000435356 2205 ntBASIC21■□□□□ 0.95
FOXD4L1Q9NU39 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 GXYLT1P6-201ENST00000456472 1187 ntBASIC21■□□□□ 0.95
FOXD4L1Q9NU39 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21■□□□□ 0.95
FOXD4L1Q9NU39 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
FOXD4L1Q9NU39 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms