Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC42SE2Q9NRR3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CDC42SE2Q9NRR3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CDC42SE2Q9NRR3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 STARP1-201ENST00000397973 869 ntBASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 COX11P1-201ENST00000489116 835 ntBASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 ZNF444P1-201ENST00000559497 298 ntBASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CDC42SE2Q9NRR3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 AC018695.7-201ENST00000624587 2492 ntBASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 LIN28AP1-201ENST00000429574 405 ntBASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 GPR32P1-201ENST00000601788 811 ntBASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 AC145285.6-201ENST00000604632 637 ntBASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms