Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 PAWRP1-201ENST00000451083 565 ntBASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 CXCL1P1-201ENST00000502804 216 ntBASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 YBX1P5-201ENST00000509441 847 ntBASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 AC007064.4-201ENST00000637740 555 ntBASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPHK2Q9NRA0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 DNAJB3-202ENST00000449667 1266 ntBASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 MIR4469-201ENST00000583919 79 ntBASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 AC023141.13-201ENST00000604991 943 ntBASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 AC025580.3-201ENST00000617932 1424 ntBASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.68■□□□□ 0.42
SPHK2Q9NRA0 AC133963.1-201ENST00000504166 1679 ntBASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 HTR5BP-201ENST00000430851 1154 ntBASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 MKNK2P1-201ENST00000437526 628 ntBASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 AP006288.1-201ENST00000446065 395 ntBASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SPHK2Q9NRA0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms