Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 BX664615.1-201ENST00000443558 458 ntBASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 LINC01023-201ENST00000606054 436 ntBASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 AL138831.2-201ENST00000606564 490 ntBASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 AC012306.2-201ENST00000609350 630 ntBASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 AL162727.3-201ENST00000635661 2787 ntBASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 PCDHB17P-201ENST00000539533 2393 ntBASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 AC005336.2-201ENST00000593183 939 ntBASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 AL135999.2-201ENST00000622438 1686 ntBASIC16.46■□□□□ 0.23
SLC52A3Q9NQ40 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC52A3Q9NQ40 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SLC52A3Q9NQ40 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
SLC52A3Q9NQ40 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 AL353593.2-201ENST00000602529 1483 ntBASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC52A3Q9NQ40 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 TERF1P1-201ENST00000311003 1181 ntBASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 LIN28AP1-201ENST00000429574 405 ntBASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 AL359075.1-203ENST00000462729 1002 ntBASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC52A3Q9NQ40 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms