Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 AL691403.2-201ENST00000618460 490 ntBASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR1BQ9H9Y6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 MIR149-201ENST00000384879 89 ntBASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 AC068472.1-201ENST00000474589 881 ntBASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLR1BQ9H9Y6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
POLR1BQ9H9Y6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 PGAM5P1-201ENST00000518923 814 ntBASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 IGHV3-22-201ENST00000520721 359 ntBASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 FAM197Y3-203ENST00000618346 717 ntBASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 AC104109.2-201ENST00000602919 1418 ntBASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 AD000864.1-201ENST00000624076 2295 ntBASIC17.26■□□□□ 0.35
POLR1BQ9H9Y6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms