Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PNMA6B-201ENST00000538162 1200 ntBASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 AC009065.1-201ENST00000564055 1225 ntBASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 AC008687.6-201ENST00000596318 630 ntBASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 AC092118.2-201ENST00000613495 667 ntBASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
LCE3DQ9BYE3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms