Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 TERF1P1-201ENST00000311003 1181 ntBASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 Z83836.1-201ENST00000624605 1642 ntBASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 TNRC18P3-201ENST00000441896 2691 ntBASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHANK2-AS3Q9BTD1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 RNF152P1-201ENST00000397754 604 ntBASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 TSPY5P-201ENST00000426936 936 ntBASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC109462.3-201ENST00000573934 613 ntBASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC019129.2-201ENST00000609837 1235 ntBASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SHANK2-AS3Q9BTD1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms