Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AL160237.2-201ENST00000556165 472 ntBASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 AC148477.5-201ENST00000625164 1645 ntBASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCM2Q9BSQ5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 AC016396.2-201ENST00000562575 1417 ntBASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 PRYP5-201ENST00000451909 266 ntBASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 BX005266.1-201ENST00000473402 457 ntBASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 AC064862.7-201ENST00000604520 867 ntBASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 AL031008.1-201ENST00000619963 541 ntBASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCM2Q9BSQ5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 AC012313.1-201ENST00000593393 3059 ntBASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 SART3-203ENST00000546611 1184 ntBASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 AL022326.1-202ENST00000641533 845 ntBASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCM2Q9BSQ5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 AC004817.3-201ENST00000602957 2129 ntBASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 AC079781.3-201ENST00000449110 356 ntBASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 AC104692.2-201ENST00000603054 253 ntBASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCM2Q9BSQ5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms