Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMOQ99835 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.21■□□□□ 0.51
SMOQ99835 Z83851.2-201ENST00000609564 659 ntBASIC18.21■□□□□ 0.51
SMOQ99835 AL805961.1-202ENST00000641562 540 ntBASIC18.21■□□□□ 0.51
SMOQ99835 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMOQ99835 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMOQ99835 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMOQ99835 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMOQ99835 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.21■□□□□ 0.51
SMOQ99835 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMOQ99835 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.21■□□□□ 0.51
SMOQ99835 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SMOQ99835 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
SMOQ99835 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.2■□□□□ 0.5
SMOQ99835 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SMOQ99835 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.2■□□□□ 0.5
SMOQ99835 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.2■□□□□ 0.5
SMOQ99835 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 AC016396.2-201ENST00000562575 1417 ntBASIC18.2■□□□□ 0.5
SMOQ99835 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.2■□□□□ 0.5
SMOQ99835 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMOQ99835 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.2■□□□□ 0.5
SMOQ99835 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.2■□□□□ 0.5
SMOQ99835 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SMOQ99835 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.19■□□□□ 0.5
SMOQ99835 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.19■□□□□ 0.5
SMOQ99835 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.19■□□□□ 0.5
SMOQ99835 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 MIR574-201ENST00000385209 96 ntBASIC18.19■□□□□ 0.5
SMOQ99835 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 CROCCP2-202ENST00000412962 2773 ntBASIC18.19■□□□□ 0.5
SMOQ99835 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.19■□□□□ 0.5
SMOQ99835 IGHV3-65-201ENST00000523210 341 ntBASIC18.19■□□□□ 0.5
SMOQ99835 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.19■□□□□ 0.5
SMOQ99835 AC008667.4-201ENST00000607370 168 ntBASIC18.19■□□□□ 0.5
SMOQ99835 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMOQ99835 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMOQ99835 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SMOQ99835 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMOQ99835 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMOQ99835 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SMOQ99835 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMOQ99835 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.18■□□□□ 0.5
SMOQ99835 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMOQ99835 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SMOQ99835 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMOQ99835 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SMOQ99835 AP002414.1-201ENST00000391405 1147 ntBASIC18.18■□□□□ 0.5
SMOQ99835 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMOQ99835 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMOQ99835 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms