Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.54■□□□□ 0.24
BBS4Q96RK4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BBS4Q96RK4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BBS4Q96RK4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BBS4Q96RK4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BBS4Q96RK4 AC016396.2-201ENST00000562575 1417 ntBASIC16.53■□□□□ 0.24
BBS4Q96RK4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 DRAXINP1-201ENST00000437611 948 ntBASIC16.53■□□□□ 0.24
BBS4Q96RK4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 AP005901.3-202ENST00000581653 237 ntBASIC16.53■□□□□ 0.24
BBS4Q96RK4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 AC010331.1-201ENST00000611423 582 ntBASIC16.53■□□□□ 0.24
BBS4Q96RK4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BBS4Q96RK4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.53■□□□□ 0.24
BBS4Q96RK4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 AP002383.4-201ENST00000442518 975 ntBASIC16.52■□□□□ 0.24
BBS4Q96RK4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 TPSP2-201ENST00000561760 610 ntBASIC16.52■□□□□ 0.24
BBS4Q96RK4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BBS4Q96RK4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
BBS4Q96RK4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.52■□□□□ 0.23
BBS4Q96RK4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BBS4Q96RK4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
BBS4Q96RK4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
BBS4Q96RK4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
BBS4Q96RK4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.52■□□□□ 0.23
BBS4Q96RK4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.52■□□□□ 0.23
BBS4Q96RK4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 AC012313.1-201ENST00000593393 3059 ntBASIC16.51■□□□□ 0.23
BBS4Q96RK4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms