Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 HLA-A-201ENST00000376802 1334 ntBASIC17.95■□□□□ 0.46
RPRD1AQ96P16 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.95■□□□□ 0.46
RPRD1AQ96P16 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.94■□□□□ 0.46
RPRD1AQ96P16 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 FAM215A-202ENST00000632077 792 ntBASIC17.94■□□□□ 0.46
RPRD1AQ96P16 AC107918.4-202ENST00000641623 219 ntBASIC17.94■□□□□ 0.46
RPRD1AQ96P16 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPRD1AQ96P16 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 AC097637.2-201ENST00000624096 1997 ntBASIC17.93■□□□□ 0.46
RPRD1AQ96P16 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 LAGE3P1-201ENST00000425356 484 ntBASIC17.93■□□□□ 0.46
RPRD1AQ96P16 AC093909.1-201ENST00000504731 1122 ntBASIC17.93■□□□□ 0.46
RPRD1AQ96P16 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RPRD1AQ96P16 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.92■□□□□ 0.46
RPRD1AQ96P16 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms