Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CFAP53Q96M91 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CFAP53Q96M91 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP53Q96M91 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP53Q96M91 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP53Q96M91 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP53Q96M91 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP53Q96M91 AC073621.1-201ENST00000392730 636 ntBASIC23.24■■□□□ 1.31
CFAP53Q96M91 CENPM-204ENST00000402420 688 ntTSL 5 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 AL356488.2-201ENST00000602755 427 ntBASIC23.24■■□□□ 1.31
CFAP53Q96M91 AC120114.3-201ENST00000611923 658 ntBASIC23.24■■□□□ 1.31
CFAP53Q96M91 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.24■■□□□ 1.31
CFAP53Q96M91 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP53Q96M91 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP53Q96M91 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP53Q96M91 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
CFAP53Q96M91 AC016396.2-201ENST00000562575 1417 ntBASIC23.24■■□□□ 1.31
CFAP53Q96M91 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP53Q96M91 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP53Q96M91 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP53Q96M91 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP53Q96M91 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 AC098831.1-202ENST00000438821 336 ntBASIC23.23■■□□□ 1.31
CFAP53Q96M91 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP53Q96M91 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 PGM5P2-202ENST00000637225 1043 ntBASIC23.23■■□□□ 1.31
CFAP53Q96M91 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
CFAP53Q96M91 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP53Q96M91 AC006504.4-201ENST00000592118 1568 ntBASIC23.23■■□□□ 1.31
CFAP53Q96M91 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 GPR89P-201ENST00000407924 1495 ntBASIC23.22■■□□□ 1.31
CFAP53Q96M91 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP53Q96M91 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC23.22■■□□□ 1.31
CFAP53Q96M91 LINC00896-202ENST00000609602 2128 ntBASIC23.21■■□□□ 1.31
CFAP53Q96M91 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP53Q96M91 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 AC005593.1-201ENST00000624894 515 ntBASIC23.21■■□□□ 1.31
CFAP53Q96M91 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP53Q96M91 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP53Q96M91 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CFAP53Q96M91 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP53Q96M91 TPR-209ENST00000613151 2478 ntTSL 5 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms