Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 RNF126P1-202ENST00000569893 925 ntBASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 AC012306.2-201ENST00000609350 630 ntBASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHAMP1Q96JM3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 VENTXP5-201ENST00000523979 775 ntBASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 AL512604.3-201ENST00000569583 964 ntBASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 AC139887.4-201ENST00000607877 719 ntBASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 AL353692.3-201ENST00000407031 1396 ntBASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHAMP1Q96JM3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CHAMP1Q96JM3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 AC034232.1-201ENST00000506026 1064 ntBASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 KRT18P22-201ENST00000402024 1347 ntBASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHAMP1Q96JM3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 AL162727.3-201ENST00000635661 2787 ntBASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHAMP1Q96JM3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHAMP1Q96JM3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms