Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHDQ96IW2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.47■□□□□ 0.39
SHDQ96IW2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SHDQ96IW2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.46■□□□□ 0.39
SHDQ96IW2 FO538757.1-201ENST00000623083 1397 ntBASIC17.46■□□□□ 0.39
SHDQ96IW2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.46■□□□□ 0.39
SHDQ96IW2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.46■□□□□ 0.39
SHDQ96IW2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.46■□□□□ 0.39
SHDQ96IW2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SHDQ96IW2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.46■□□□□ 0.39
SHDQ96IW2 DUX4L17-201ENST00000557360 1267 ntBASIC17.46■□□□□ 0.39
SHDQ96IW2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SHDQ96IW2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SHDQ96IW2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.46■□□□□ 0.39
SHDQ96IW2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 AL158211.3-201ENST00000607385 239 ntBASIC17.46■□□□□ 0.39
SHDQ96IW2 AL390754.1-201ENST00000619088 582 ntBASIC17.46■□□□□ 0.39
SHDQ96IW2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.46■□□□□ 0.39
SHDQ96IW2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.46■□□□□ 0.39
SHDQ96IW2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SHDQ96IW2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SHDQ96IW2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHDQ96IW2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SHDQ96IW2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SHDQ96IW2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SHDQ96IW2 AL135999.2-201ENST00000622438 1686 ntBASIC17.45■□□□□ 0.38
SHDQ96IW2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SHDQ96IW2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHDQ96IW2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SHDQ96IW2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SHDQ96IW2 AC046185.3-201ENST00000623228 1824 ntBASIC17.45■□□□□ 0.38
SHDQ96IW2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.45■□□□□ 0.38
SHDQ96IW2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHDQ96IW2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SHDQ96IW2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHDQ96IW2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHDQ96IW2 HLA-J-202ENST00000469281 1241 ntBASIC17.45■□□□□ 0.38
SHDQ96IW2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.45■□□□□ 0.38
SHDQ96IW2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.45■□□□□ 0.38
SHDQ96IW2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.45■□□□□ 0.38
SHDQ96IW2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.45■□□□□ 0.38
SHDQ96IW2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.45■□□□□ 0.38
SHDQ96IW2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.45■□□□□ 0.38
SHDQ96IW2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHDQ96IW2 UXT-AS1-201ENST00000590504 1525 ntBASIC17.45■□□□□ 0.38
SHDQ96IW2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SHDQ96IW2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.45■□□□□ 0.38
SHDQ96IW2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHDQ96IW2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHDQ96IW2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHDQ96IW2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.45■□□□□ 0.38
SHDQ96IW2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHDQ96IW2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.45■□□□□ 0.38
SHDQ96IW2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SHDQ96IW2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHDQ96IW2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHDQ96IW2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.44■□□□□ 0.38
SHDQ96IW2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHDQ96IW2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHDQ96IW2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHDQ96IW2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHDQ96IW2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SHDQ96IW2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.44■□□□□ 0.38
SHDQ96IW2 TREML5P-201ENST00000421694 576 ntBASIC17.44■□□□□ 0.38
SHDQ96IW2 GPS2P2-201ENST00000430745 888 ntBASIC17.44■□□□□ 0.38
SHDQ96IW2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.44■□□□□ 0.38
SHDQ96IW2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.44■□□□□ 0.38
SHDQ96IW2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.44■□□□□ 0.38
SHDQ96IW2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.44■□□□□ 0.38
SHDQ96IW2 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.44■□□□□ 0.38
SHDQ96IW2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.44■□□□□ 0.38
SHDQ96IW2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.44■□□□□ 0.38
SHDQ96IW2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHDQ96IW2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.44■□□□□ 0.38
SHDQ96IW2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.44■□□□□ 0.38
SHDQ96IW2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHDQ96IW2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHDQ96IW2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHDQ96IW2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.43■□□□□ 0.38
SHDQ96IW2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHDQ96IW2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.43■□□□□ 0.38
SHDQ96IW2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHDQ96IW2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHDQ96IW2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHDQ96IW2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.43■□□□□ 0.38
SHDQ96IW2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHDQ96IW2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.43■□□□□ 0.38
SHDQ96IW2 SPCS2P4-201ENST00000436160 681 ntBASIC17.43■□□□□ 0.38
SHDQ96IW2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.43■□□□□ 0.38
SHDQ96IW2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms