Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 SPDYE21P-201ENST00000413323 827 ntBASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 AL020989.1-201ENST00000422979 469 ntBASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 SIGLEC30P-201ENST00000455569 941 ntBASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 AC124067.4-201ENST00000519691 2379 ntBASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 ACTG1P4-201ENST00000425123 1122 ntBASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.98■□□□□ 0.31
PDLIM5Q96HC4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 AL591684.3-201ENST00000605187 298 ntBASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms