Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 POM121L3P-201ENST00000419331 1163 ntBASIC17.98■□□□□ 0.47
IFT43Q96FT9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 AC104692.2-201ENST00000603054 253 ntBASIC17.98■□□□□ 0.47
IFT43Q96FT9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
IFT43Q96FT9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.98■□□□□ 0.47
IFT43Q96FT9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 AC138894.3-201ENST00000603787 634 ntBASIC17.97■□□□□ 0.47
IFT43Q96FT9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 NSUN5P1-202ENST00000421140 1535 ntBASIC17.97■□□□□ 0.47
IFT43Q96FT9 NSUN5P2-203ENST00000457352 1529 ntBASIC17.97■□□□□ 0.47
IFT43Q96FT9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
IFT43Q96FT9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
IFT43Q96FT9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IFT43Q96FT9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.96■□□□□ 0.47
IFT43Q96FT9 AL031008.1-201ENST00000619963 541 ntBASIC17.96■□□□□ 0.47
IFT43Q96FT9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms