Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 AC139887.3-201ENST00000568585 713 ntBASIC17.28■□□□□ 0.36
SCAMP4Q969E2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 AL589182.2-201ENST00000619332 1049 ntBASIC17.28■□□□□ 0.36
SCAMP4Q969E2 AC008735.5-201ENST00000623544 497 ntBASIC17.28■□□□□ 0.36
SCAMP4Q969E2 AC116407.3-201ENST00000623905 1129 ntBASIC17.28■□□□□ 0.36
SCAMP4Q969E2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 PP12613-201ENST00000424958 2230 ntBASIC17.28■□□□□ 0.36
SCAMP4Q969E2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SCAMP4Q969E2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 AP002414.3-201ENST00000589352 1468 ntBASIC17.27■□□□□ 0.36
SCAMP4Q969E2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 AC093909.1-201ENST00000504731 1122 ntBASIC17.27■□□□□ 0.36
SCAMP4Q969E2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP4Q969E2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 NCF1C-201ENST00000438382 1427 ntBASIC17.27■□□□□ 0.35
SCAMP4Q969E2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SCAMP4Q969E2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 LINC00982-205ENST00000420957 435 ntBASIC17.26■□□□□ 0.35
SCAMP4Q969E2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.26■□□□□ 0.35
SCAMP4Q969E2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms