Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TNFRSF25Q93038 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 NCF1C-201ENST00000438382 1427 ntBASIC19.69■□□□□ 0.74
TNFRSF25Q93038 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 GPR89P-201ENST00000407924 1495 ntBASIC19.69■□□□□ 0.74
TNFRSF25Q93038 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 AC018712.1-201ENST00000455767 687 ntBASIC19.69■□□□□ 0.74
TNFRSF25Q93038 SCARNA2-201ENST00000458748 420 ntBASIC19.69■□□□□ 0.74
TNFRSF25Q93038 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 AL139424.1-201ENST00000607572 797 ntBASIC19.69■□□□□ 0.74
TNFRSF25Q93038 AL031008.1-201ENST00000619963 541 ntBASIC19.69■□□□□ 0.74
TNFRSF25Q93038 AC004706.3-202ENST00000621574 984 ntBASIC19.69■□□□□ 0.74
TNFRSF25Q93038 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFRSF25Q93038 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 HNRNPDP1-201ENST00000439535 754 ntBASIC19.68■□□□□ 0.74
TNFRSF25Q93038 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.68■□□□□ 0.74
TNFRSF25Q93038 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.68■□□□□ 0.74
TNFRSF25Q93038 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFRSF25Q93038 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 AL121761.2-201ENST00000598007 1648 ntBASIC19.67■□□□□ 0.74
TNFRSF25Q93038 AP002414.1-201ENST00000391405 1147 ntBASIC19.67■□□□□ 0.74
TNFRSF25Q93038 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.67■□□□□ 0.74
TNFRSF25Q93038 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFRSF25Q93038 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms