Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 AC002347.1-201ENST00000569543 541 ntBASIC15.69■□□□□ 0.1
PHF3Q92576 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.69■□□□□ 0.1
PHF3Q92576 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHF3Q92576 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.69■□□□□ 0.1
PHF3Q92576 AC108860.2-201ENST00000562760 2183 ntBASIC15.69■□□□□ 0.1
PHF3Q92576 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHF3Q92576 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF3Q92576 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PHF3Q92576 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHF3Q92576 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF3Q92576 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
PHF3Q92576 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF3Q92576 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PHF3Q92576 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHF3Q92576 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF3Q92576 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHF3Q92576 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHF3Q92576 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
PHF3Q92576 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF3Q92576 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.68■□□□□ 0.1
PHF3Q92576 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PHF3Q92576 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF3Q92576 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.68■□□□□ 0.1
PHF3Q92576 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.68■□□□□ 0.1
PHF3Q92576 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.68■□□□□ 0.1
PHF3Q92576 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.68■□□□□ 0.1
PHF3Q92576 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
PHF3Q92576 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.68■□□□□ 0.1
PHF3Q92576 AC073592.4-201ENST00000623827 446 ntBASIC15.68■□□□□ 0.1
PHF3Q92576 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PHF3Q92576 PGM5P2-202ENST00000637225 1043 ntBASIC15.68■□□□□ 0.1
PHF3Q92576 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF3Q92576 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PHF3Q92576 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PHF3Q92576 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF3Q92576 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.68■□□□□ 0.1
PHF3Q92576 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.68■□□□□ 0.1
PHF3Q92576 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PHF3Q92576 AL353593.2-201ENST00000602529 1483 ntBASIC15.68■□□□□ 0.1
PHF3Q92576 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 AC080080.1-201ENST00000625121 2420 ntBASIC15.68■□□□□ 0.1
PHF3Q92576 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 MIR940-201ENST00000401276 94 ntBASIC15.68■□□□□ 0.1
PHF3Q92576 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.68■□□□□ 0.1
PHF3Q92576 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF3Q92576 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.68■□□□□ 0.1
PHF3Q92576 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.68■□□□□ 0.1
PHF3Q92576 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PHF3Q92576 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHF3Q92576 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 HTR7P1-202ENST00000624664 4411 ntBASIC15.67■□□□□ 0.1
PHF3Q92576 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.67■□□□□ 0.1
PHF3Q92576 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PHF3Q92576 HMGN1P19-201ENST00000436976 333 ntBASIC15.67■□□□□ 0.1
PHF3Q92576 BX005266.1-201ENST00000473402 457 ntBASIC15.67■□□□□ 0.1
PHF3Q92576 RNA5SP416-201ENST00000516838 111 ntBASIC15.67■□□□□ 0.1
PHF3Q92576 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.67■□□□□ 0.1
PHF3Q92576 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PHF3Q92576 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.67■□□□□ 0.1
PHF3Q92576 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 SIRPAP1-201ENST00000448467 1770 ntBASIC15.67■□□□□ 0.1
PHF3Q92576 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PHF3Q92576 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PHF3Q92576 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms