Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 AC092068.3-201ENST00000587894 2016 ntBASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 AL355075.4-201ENST00000554988 638 ntBASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.25■□□□□ 0.35
RFWD2Q8NHY2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 MIR1238-201ENST00000408483 83 ntBASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 SEC1P-202ENST00000473944 940 ntBASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RFWD2Q8NHY2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD2Q8NHY2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms